Species Overview Data
A summary of sequences for each of the species within the Solanaceae Genomics Resource are listed below.
Species with fully sequenced genomes
| Model Species |
Source |
Version |
Number of Representative Gene Models |
| Arabidopsis thaliana |
TAIR |
TAIR 10 |
27,416 |
| Solanum lycopersicum |
SGN |
Assembly SL2.40, Annotation ITAG2.3 |
34,727 |
| Solanum tuberosum group Phureja DM1-3 - PGSC |
Potato Genome Sequencing Consortium |
Release: Annotation v3.4, Assembly v3, Pseudomolecules v2.1.11 |
39,031 |
| Solanum tuberosum group Phureja DM1-3 - iTAG |
iTAG |
1 |
35,004 |
Species with PlantGDB transcript assemblies annotated within the Solanaceae Genomics Resource
| Transcript Assembly Species |
PlantGDB Version |
Number of Filtered Transcript Assemblies |
| Capsicum annuum |
171a |
29,308 |
| Nicotiana benthamiana |
173a |
19,650 |
| Nicotiana langsdorffii x Nicotiana sanderae |
157a |
5,029 |
| Nicotiana sylvestris |
163a |
3,611 |
| Nicotiana tabacum |
173a |
115,343 |
| Petunia x hybrida |
159a |
8,463 |
| Solanum chacoense |
163a |
2,178 |
| Solanum habrochaites |
175a |
10,430 |
| Solanum melongena |
175a |
24,570 |
| Solanum pennellii |
175a |
4,168 |