• Analyses/Tools

• Genome Browsers
  • Solanaceae
  • Arabidopsis
  • Grape
  • Poplar
• BLAST Search
• Comparative Mapping
• Orthologs/Paralogs
• Lineage-Specific Genes
• SNPs
• SSRs
  • SSR Database Search
  • SSR Summary Statistics
  • SSR Pipeline
  • SSR Downloads
• QTL Papers
• Solanaceae Repeat Database

Analyses/Tools

Genome Browsers

Comparative genome databases for the Solanaceae using the GMOD Generic Genome Browser GMOD Generic Genome Browser.

BLAST Search

BLAST tool for searching sequences against the Solanaceae Genomics Resource databases.

Solanaceae Comparative Mapping

Arabidopsis, Grape and Poplar top hits for Solanaceae sequences.

Solanaceae Ortholog/Paralog Analysis

Results from assignment of putative orthology/paralogy for Solanaceae genes.

Solanaceae Lineage-Specific Gene Analysis

Results from analysis to identify Solanaceae lineage-specific transcripts.

Solanaceae SNP Analysis

SNPs predicted from Solanaceae transcript assemblies.

Solanaceae SSR Analysis

Simple sequence repeats identified in Solanaceae sequence.

QTL Papers

List of papers with QTL data for Solanaceae species.

Solanaceae Repeat Database

Repeat regions identified in Solanaceae transcript assemblies.